Package: blaster 1.0.9

Manu Tamminen

blaster: Native R Implementation of an Efficient BLAST-Like Algorithm

Implementation of an efficient BLAST-like sequence comparison algorithm, written in 'C++11' and using native R datatypes. Blaster is based on 'nsearch' - Schmid et al (2018) <doi:10.1101/399782>.

Authors:Manu Tamminen [aut, cre], Timothy Julian [aut], Aditya Jeevennavar [aut], Steven Schmid [aut]

blaster_1.0.9.tar.gz
blaster_1.0.9.zip(r-4.7-x86_64)blaster_1.0.9.zip(r-4.7-arm64)blaster_1.0.9.zip(r-4.6-x86_64)blaster_1.0.9.zip(r-4.6-arm64)blaster_1.0.9.zip(r-4.5-x86_64)
blaster_1.0.9.tgz(r-4.6-x86_64)blaster_1.0.9.tgz(r-4.6-arm64)blaster_1.0.9.tgz(r-4.5-x86_64)blaster_1.0.9.tgz(r-4.5-arm64)
blaster_1.0.9.tar.gz(r-4.7-arm64)blaster_1.0.9.tar.gz(r-4.7-x86_64)blaster_1.0.9.tar.gz(r-4.6-arm64)blaster_1.0.9.tar.gz(r-4.6-x86_64)
blaster_1.0.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
blaster/json (API)

# Install 'blaster' in R:
install.packages('blaster', repos = c('https://tamminenlab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tamminenlab/blaster/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

4.65 score 15 stars 1 packages 2 scripts 404 downloads 1 mentions 2 exports 1 dependencies

Last updated from:b14a7d5b2d. Checks:15 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK124
linux-devel-x86_64OK131
source / vignettesOK178
linux-release-arm64OK107
linux-release-x86_64OK102
macos-release-arm64OK155
macos-release-x86_64OK203
macos-oldrel-arm64OK123
macos-oldrel-x86_64OK284
windows-devel-arm64OK323
windows-devel-x86_64OK135
windows-release-arm64OK322
windows-release-x86_64OK96
windows-oldrel-x86_64OK91
wasm-releaseOK87

Exports:blastread_fasta

Dependencies:Rcpp