Package: blaster 1.0.9

Manu Tamminen
blaster: Native R Implementation of an Efficient BLAST-Like Algorithm
Implementation of an efficient BLAST-like sequence comparison algorithm, written in 'C++11' and using native R datatypes. Blaster is based on 'nsearch' - Schmid et al (2018) <doi:10.1101/399782>.
Authors:
blaster_1.0.9.tar.gz
blaster_1.0.9.zip(r-4.7)blaster_1.0.9.zip(r-4.6)blaster_1.0.9.zip(r-4.5)
blaster_1.0.9.tgz(r-4.6-x86_64)blaster_1.0.9.tgz(r-4.6-arm64)blaster_1.0.9.tgz(r-4.5-x86_64)blaster_1.0.9.tgz(r-4.5-arm64)
blaster_1.0.9.tar.gz(r-4.7-arm64)blaster_1.0.9.tar.gz(r-4.7-x86_64)blaster_1.0.9.tar.gz(r-4.6-arm64)blaster_1.0.9.tar.gz(r-4.6-x86_64)
blaster_1.0.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
blaster/json (API)
| # Install 'blaster' in R: |
| install.packages('blaster', repos = c('https://tamminenlab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tamminenlab/blaster/issues
Last updated from:b14a7d5b2d. Checks:13 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 113 | ||
| linux-devel-x86_64 | OK | 118 | ||
| source / vignettes | OK | 204 | ||
| linux-release-arm64 | OK | 124 | ||
| linux-release-x86_64 | OK | 102 | ||
| macos-release-arm64 | OK | 142 | ||
| macos-release-x86_64 | OK | 408 | ||
| macos-oldrel-arm64 | OK | 139 | ||
| macos-oldrel-x86_64 | OK | 269 | ||
| windows-devel | OK | 120 | ||
| windows-release | OK | 110 | ||
| windows-oldrel | OK | 155 | ||
| wasm-release | OK | 100 |
Exports:blastread_fasta
Dependencies:Rcpp
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Runs BLAST sequence comparison algorithm. | blast |
| Blaster | blaster |
| Reads the contents of nucleotide or protein FASTA file into a dataframe. | read_fasta |