Package: blaster 1.0.9

Manu Tamminen

blaster: Native R Implementation of an Efficient BLAST-Like Algorithm

Implementation of an efficient BLAST-like sequence comparison algorithm, written in 'C++11' and using native R datatypes. Blaster is based on 'nsearch' - Schmid et al (2018) <doi:10.1101/399782>.

Authors:Manu Tamminen [aut, cre], Timothy Julian [aut], Aditya Jeevennavar [aut], Steven Schmid [aut]

blaster_1.0.9.tar.gz
blaster_1.0.9.zip(r-4.7)blaster_1.0.9.zip(r-4.6)blaster_1.0.9.zip(r-4.5)
blaster_1.0.9.tgz(r-4.6-x86_64)blaster_1.0.9.tgz(r-4.6-arm64)blaster_1.0.9.tgz(r-4.5-x86_64)blaster_1.0.9.tgz(r-4.5-arm64)
blaster_1.0.9.tar.gz(r-4.7-arm64)blaster_1.0.9.tar.gz(r-4.7-x86_64)blaster_1.0.9.tar.gz(r-4.6-arm64)blaster_1.0.9.tar.gz(r-4.6-x86_64)
blaster_1.0.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
blaster/json (API)

# Install 'blaster' in R:
install.packages('blaster', repos = c('https://tamminenlab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tamminenlab/blaster/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

4.92 score 14 stars 2 packages 2 scripts 654 downloads 1 mentions 2 exports 1 dependencies

Last updated from:b14a7d5b2d. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK113
linux-devel-x86_64OK118
source / vignettesOK204
linux-release-arm64OK124
linux-release-x86_64OK102
macos-release-arm64OK142
macos-release-x86_64OK408
macos-oldrel-arm64OK139
macos-oldrel-x86_64OK269
windows-develOK120
windows-releaseOK110
windows-oldrelOK155
wasm-releaseOK100

Exports:blastread_fasta

Dependencies:Rcpp