{
  "_id": "6a1542c7acfb0bcc41d564ac",
  "Package": "blaster",
  "Type": "Package",
  "Title": "Native R Implementation of an Efficient BLAST-Like Algorithm",
  "Version": "1.0.9",
  "Date": "2026-04-24",
  "Authors@R": "c(person(\"Manu\", \"Tamminen\",\nemail = \"mavatam@utu.fi\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-5891-7653\")),\nperson(\"Timothy\", \"Julian\",\nemail = \"tim.julian@eawag.ch\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0000-0003-1000-0306\")),\nperson(\"Aditya\", \"Jeevennavar\",\nemail=\"aditya.a.jeevannavar@utu.fi\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0000-0002-0737-7316\")),\nperson(\"Steven\", \"Schmid\",\nemail=\"stevschmid@gmail.com\",\nrole = c(\"aut\")))",
  "Maintainer": "Manu Tamminen <mavatam@utu.fi>",
  "Description": "Implementation of an efficient BLAST-like sequence\ncomparison algorithm, written in 'C++11' and using native R\ndatatypes. Blaster is based on 'nsearch' - Schmid et al (2018)\n<doi:10.1101/399782>.",
  "License": "BSD_3_clause + file LICENSE",
  "RoxygenNote": "7.1.1",
  "URL": "https://github.com/tamminenlab/blaster",
  "Repository": "https://tamminenlab.r-universe.dev",
  "Date/Publication": "2026-04-24 12:12:32 UTC",
  "RemoteUrl": "https://github.com/tamminenlab/blaster",
  "RemoteRef": "HEAD",
  "RemoteSha": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-26 06:43:04 UTC",
    "User": "root"
  },
  "Author": "Manu Tamminen [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-5891-7653>),\nTimothy Julian [aut] (ORCID: <https://orcid.org/0000-0003-1000-0306>),\nAditya Jeevennavar [aut] (ORCID:\n<https://orcid.org/0000-0002-0737-7316>),\nSteven Schmid [aut]",
  "MD5sum": "a89451089cad2bc1edc30cb4cfaaedc0",
  "_user": "tamminenlab",
  "_type": "src",
  "_file": "blaster_1.0.9.tar.gz",
  "_fileid": "629a61158a7c7fadd59466fda5fc0b07e7e9538d2e8d33cb0f67b8d023a8b8c9",
  "_filesize": 115917,
  "_sha256": "629a61158a7c7fadd59466fda5fc0b07e7e9538d2e8d33cb0f67b8d023a8b8c9",
  "_created": "2026-05-26T06:43:04.000Z",
  "_published": "2026-05-26T06:50:47.443Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77821265668,
      "time": 113,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7210536121"
    },
    {
      "job": 77821265656,
      "time": 118,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7210537382"
    },
    {
      "job": 77821265671,
      "time": 124,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7210538494"
    },
    {
      "job": 77821265661,
      "time": 102,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7210533496"
    },
    {
      "job": 77821265662,
      "time": 139,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7210538145"
    },
    {
      "job": 77821265675,
      "time": 269,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7210567671"
    },
    {
      "job": 77821265663,
      "time": 142,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7210535480"
    },
    {
      "job": 77821265660,
      "time": 408,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7210588684"
    },
    {
      "job": 77820854093,
      "time": 204,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7210508310"
    },
    {
      "job": 77821265630,
      "time": 100,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7210533154"
    },
    {
      "job": 77821265655,
      "time": 120,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7210537815"
    },
    {
      "job": 77821265646,
      "time": 155,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7210546032"
    },
    {
      "job": 77821265652,
      "time": 110,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7210535312"
    }
  ],
  "_buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/tamminenlab/blaster",
  "_commit": {
    "id": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
    "author": "Manu Tamminen <mavata@gmail.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #9 from tamminenlab/claude/cran-no-home-writes\n\nWrite blast() output to tempdir(), not getwd()",
    "time": 1777032752
  },
  "_maintainer": {
    "name": "Manu Tamminen",
    "email": "mavatam@utu.fi",
    "orcid": "0000-0001-5891-7653"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 1.0.5",
      "role": "Imports"
    }
  ],
  "_owner": "tamminenlab",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [
    {
      "week": "2026-17",
      "n": 3
    }
  ],
  "_tags": [],
  "_stars": 14,
  "_contributors": [
    {
      "user": "manutamminen",
      "count": 88,
      "uuid": 3449552
    },
    {
      "user": "jeevannavar",
      "count": 6,
      "uuid": 45782309
    },
    {
      "user": "alexlesch98",
      "count": 1,
      "uuid": 160536953
    }
  ],
  "_userbio": {
    "uuid": 97543407,
    "type": "organization",
    "name": "tamminenlab"
  },
  "_downloads": {
    "count": 654,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/blaster"
  },
  "_mentions": 1,
  "_devurl": "https://github.com/tamminenlab/blaster",
  "_searchresults": 2,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/blaster.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/tamminenlab/blaster",
  "_realowner": "tamminenlab",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0",
      "date": "2021-02-10"
    },
    {
      "version": "1.0.3",
      "date": "2021-03-07"
    },
    {
      "version": "1.0.4",
      "date": "2021-10-27"
    },
    {
      "version": "1.0.6",
      "date": "2023-05-11"
    },
    {
      "version": "1.0.7",
      "date": "2023-08-24"
    },
    {
      "version": "1.0.9",
      "date": "2026-04-25"
    }
  ],
  "_exports": [
    "blast",
    "read_fasta"
  ],
  "_help": [
    {
      "page": "blast",
      "title": "Runs BLAST sequence comparison algorithm.",
      "topics": [
        "blast"
      ]
    },
    {
      "page": "blaster",
      "title": "Blaster",
      "topics": [
        "blaster"
      ]
    },
    {
      "page": "read_fasta",
      "title": "Reads the contents of nucleotide or protein FASTA file into a dataframe.",
      "topics": [
        "read_fasta"
      ]
    }
  ],
  "_readme": "https://github.com/tamminenlab/blaster/raw/HEAD/README.md",
  "_rundeps": [
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 4.924279286061882,
  "_indexed": true,
  "_nocasepkg": "blaster",
  "_universes": [
    "tamminenlab"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.9",
      "date": "2026-05-26T06:45:08.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "0e654e12fa1e1041495c394e63638772ae44b3d2234a1e92d92d628b0a6e2000",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.9",
      "date": "2026-05-26T06:45:11.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "00cadddde0b64c2ef174982ec34706727f235bc4cb59ca3fca66307eebd80c53",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.9",
      "date": "2026-05-26T06:45:19.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "76854a2c99d9496d5019d3f463e987afdf47b5f382fe05bc64318f10adcaef84",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.9",
      "date": "2026-05-26T06:44:55.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "63349ab4ecad81200e551f17f10067ea3648f811e2c1043388ed232a2feced33",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.9",
      "date": "2026-05-26T06:45:24.000Z",
      "arch": "aarch64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "51c9463c07253be82a91e4d2f79b475d50089a0b2f7ec2477a95b090a61005d8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.9",
      "date": "2026-05-26T06:46:58.000Z",
      "arch": "x86_64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "36d34cf15777597bcac100bfc5b4657a14862867212ca77cd176aa3323aaf1ed",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.9",
      "date": "2026-05-26T06:45:08.000Z",
      "arch": "aarch64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "3180d899081612f998305ea5175933639f830c47448d8be7cb2d2d4f0fa81d7b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.9",
      "date": "2026-05-26T06:48:05.000Z",
      "arch": "x86_64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "dbbedab95c4d0f9615d513c213a43f56c2d675028f48e14205c8d48b30d254b7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.9",
      "date": "2026-05-26T06:45:07.000Z",
      "arch": "emscripten",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "e077e451511d016669f6a3042983bd5df74044eab29607e0296575535413bfb8",
      "status": "success",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.9",
      "date": "2026-05-26T06:44:28.000Z",
      "arch": "x86_64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "e948bdee5c0130ab023dfb9bed5377f6b54d74d10bfa93ba6ac3652e084b2afa",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.9",
      "date": "2026-05-26T06:44:49.000Z",
      "arch": "x86_64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "9b589edba0e19aca832a7ca35952800ec7ee63bf4ea178f40b9451483faae2b3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.9",
      "date": "2026-05-26T06:44:31.000Z",
      "arch": "x86_64",
      "commit": "b14a7d5b2df38ea27c9bb49744fafaef6dccfd87",
      "fileid": "a2a2272bf408689d29ecd71d1210d8421fae7eaa9e8193e4c92682f071d03c8c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/tamminenlab/actions/runs/26436621183"
    }
  ]
}